BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D12SP1|AL425864
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1653 1500 0.0
>3x_Contig1653
Length = 14012
Score = 1500 bits (755), Expect = 0.0
Identities = 779/785 (99%), Gaps = 3/785 (0%)
Strand = Plus / Minus
Query: 6 acccgatagcgttctctgccgtgcctagctggataaatcaaacgcctgagaccgtataat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10246 acccgatagcgttctctgccgtgcctagctggataaatcaaacgcctgagaccgtataat 10187
Query: 66 atccgaccgaacttatcgacttctttcctgatcctacttgtctcaagatttcatatcaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10186 atccgaccgaacttatcgacttctttcctgatcctacttgtctcaagatttcatatcaaa 10127
Query: 126 tcatcaccatacattattctctatattccactttcacatatatatatcacaatatcacaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10126 tcatcaccatacattattctctatattccactttcacatatatatatcacaatatcacaa 10067
Query: 186 tatcaaacccaattacatatatccgcagtgttcaattatagttttgaacgacttttggaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10066 tatcaaacccaattacatatatccgcagtgttcaattatagttttgaacgacttttggaa 10007
Query: 246 tccgtgcagc-ggttcttctattgaagtcagctgctggggtcagaaacaggcgta-sagt 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 10006 tccgtgcagcgggttcttctattgaagtcagctgctggggtcagaaacaggcgtagcagt 9947
Query: 304 actggtcttattcctttttcggagagggggcaggcatagagaagaggaaggggaacggac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9946 actggtcttattcctttttcggagagggggcaggcatagagaagaggaaggggaacggac 9887
Query: 364 tgttgtacgtacaaagtgatataaaatcactctgcacggacagtgttgagataaattccg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9886 tgttgtacgtacaaagtgatataaaatcactctgcacggacagtgttgagataaattccg 9827
Query: 424 agtttctggcctcctgtcttgaccctttttcccatgctacggtttctaggggggaaaatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9826 agtttctggcctcctgtcttgaccctttttcccatgctacggtttctaggggggaaaatt 9767
Query: 484 agatcctttctttggtagtgggagcaaggaaagacaggacagaggccttagg-cagtccc 542
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9766 agatcctttctttggtagtgggagcaaggaaagacaggacagaggccttaggccagtccc 9707
Query: 543 tgtttacccggactttattgaggccaacaatgacgattcacgtgacgggcgacgcgtcac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9706 tgtttacccggactttattgaggccaacaatgacgattcacgtgacgggcgacgcgtcac 9647
Query: 603 gtgaatmgtcattgtttgctatgaatgcttttttcaatgtgtcaaaagagattcatgcca 662
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9646 gtgaatcgtcattgtttgctatgaatgcttttttcaatgtgtcaaaagagattcatgcca 9587
Query: 663 gtagcgatcgaatttatacagtttatgtaattcccatcgcatcactggtgagctgtttcc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9586 gtagcgatcgaatttatacagtttatgtaattcccatcgcatcactggtgagctgtttcc 9527
Query: 723 atcattctacgtgaaaattgacaaaaaaaaaagcgatgaaatttwtgcacaatatttaca 782
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9526 atcattctacgtgaaaattgacaaaaaaaaaagcgatgaaatttatgcacaatatttaca 9467
Query: 783 ggcct 787
|||||
Sbjct: 9466 ggcct 9462
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6580
Number of Sequences: 1807
Number of extensions: 6580
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)